Structure of PDB 6k4r Chain A

Receptor sequence
>6k4rA (length=731) Species: 272624 (Legionella pneumophila subsp. pneumophila str. Philadelphia 1) [Search protein sequence]
VKQYYFARRGETSTHDTSLPPPVKVLSGRSIPLKEIPFEATRNELVQIYL
TSIDKLIKSNKLNSIPSQQIASHYLFLRSLANSETDGIKKNQILSLAKPL
GTYLASKEPHVWKMINELIEKSEYPIIHYLKNNRAHSNFMLALIHEYHKE
PLTKNQSAFVQKFRDSSVFLFPNPIYTAWLAHSYDEDSSFNPMFRERLST
NFYHSTLTDNLLLRTEPKEVTLSSEHHYKKEKGPIDSSFRYQMSSDRLLR
IQGRTLLFSTPQNDVVAVKVQKKGEPKSTLEEEFEMADYLLKHQRRLDVH
SKLPQPLGQYSVKKSEILEISRGSLTLIDDSKDLEVYVYKAPQSYFTYLH
DKNQDLEDLTASVKTNVHDLFVLLREGIVFPQLADIFHKGRYQALVQLLN
VLQFQLGRIDKWQKAVEYVNLRSSGLADLGDSLPITSLFTSSDFTKHYFS
ELLTGGYHPTFFDKSSGTANSLFTGKRRLFGNYLYLNTIAEYLLVIQLTL
GSYGDKVTRDMDKPKKEAVWRELANVMFTSCAEAIHIMTGIPQSRALTLL
KQRANIEKHFRQTQFWMTPDYSKLDEDTLQMEQYSIYSGEPEYEFTDKLV
SGVGLSVDGVHQDLGGYNRESPLRELEKLLYATVTLIEGTMQLDKEFFKQ
LEQVEKILSGEIKTDANSCFEAVAQLLDLARPGCHFQKRLVLSYYEEAKL
KYPSAPTDAYDSRFQVVARTNAAITIQRFWR
3D structure
PDB6k4r Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase.
ChainA
Resolution3.109 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.-.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AMP A R352 K367 N534 R536 D542 D545 R254 K269 N420 R422 D428 D431 PDBbind-CN: -logKd/Ki=5.84,Kd=1.45uM
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0008234 cysteine-type peptidase activity
GO:0016740 transferase activity
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:6k4r, PDBe:6k4r, PDBj:6k4r
PDBsum6k4r
PubMed31330531
UniProtQ5ZTK6|SIDJ_LEGPH Calmodulin-dependent glutamylase SidJ (Gene Name=sidJ)

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