Structure of PDB 6jo3 Chain A

Receptor sequence
>6jo3A (length=247) Species: 273075 (Thermoplasma acidophilum DSM 1728) [Search protein sequence]
MMTVLEDMLRKTRNGKVHMTLIDPGAKPPQECARIAEEAEMAGTDFIMVG
GSTDIDSRAMDEAISAIKAKTDLKVIIFPGSSLMISPKADAIFFMSLLNS
GSLEYVVGHQVKAAIPLSAMKIEKIPMAYLVFDPGMTVGRVGKAHLIPRD
DEKTALSYALAAQYFGFRLVYFEAGSGSPYHVGENVVRRVKQELDIPVIV
GGGIRTPEAAKALAQAGADMIVTGTIAERSVNVYEALHPIVESIKEV
3D structure
PDB6jo3 Crystal structure of (S)-3-O-geranylgeranylglyceryl phosphate synthase from Thermoplasma acidophilum in complex with the substrate sn-glycerol 1-phosphate.
ChainA
Resolution2.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.5.1.41: phosphoglycerol geranylgeranyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 1GP A L21 Y171 E173 S176 G201 G202 T223 G224 T225 L21 Y171 E173 S176 G201 G202 T223 G224 T225
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0002094 polyprenyltransferase activity
GO:0016740 transferase activity
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046872 metal ion binding
GO:0047294 phosphoglycerol geranylgeranyltransferase activity
Biological Process
GO:0006650 glycerophospholipid metabolic process
GO:0008654 phospholipid biosynthetic process
GO:0046474 glycerophospholipid biosynthetic process
Cellular Component
GO:0005737 cytoplasm

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External links
PDB RCSB:6jo3, PDBe:6jo3, PDBj:6jo3
PDBsum6jo3
PubMed31282866
UniProtQ9HJH3|GGGPS_THEAC Geranylgeranylglyceryl phosphate synthase (Gene Name=Ta0995)

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