Structure of PDB 6jfx Chain A

Receptor sequence
>6jfxA (length=650) Species: 343517 (Paenibacillus barengoltzii) [Search protein sequence]
HGTIDYGDVTVTGGISVFDAKFDELYVYDGDDLGAVYAPEETRFRLWAPT
ASEAFVVLYETEDGMPVKELPMKRDVQGTWTLTVAEDCGGLFYTYRVKVG
EQWNEAVDPYAKAVGVNGTKTAILDLRSTNPEGWENDQKPPLASPTDAVI
YELHVRDLSIHPQSGIREKGKFLGLTEEGTRGPNGIPTGLDHITGLGVTH
VQLLPIYDYSQESVDESRLDEPHYNWGYDPQNYNVPEGSYSTDPHNPAAR
ILELKRLIQKLHARGLRVIMDVVYNHVYDGYLIHFTKLVPGYYLRYKADR
TFSDGTFCGNECASERPIMRKYIIESILHWVREYHIDGFRFDLMGMIDIE
TMNEIRRRLDEIDPTILTIGEGWMMETVLPKELRANQDNAEKLPGIGMFN
DGMRDAVKGDIFIFDRKGFISGGDGFEDGVKRGVAGGINYGGQLRQFAVE
PVQSVNYVECHDNHTLWDKIELSTPGASDEERRAMHRLASAIVLTSQGIP
FLHAGQEFMRTKGGVENSYKSPIEVNWLDWERCAAHQDDVSYMRSLIALR
KAHPAFRLKTADEIRAHLRFEAAPPHTVAFTLRDHAGGDPDRHLYVLYNA
NPGALSLELPALGPWEVRFGGEHVLALEAGASGARLEVRGVGVVVLAVPR
3D structure
PDB6jfx Structural basis of carbohydrate binding in domain C of a type I pullulanase from Paenibacillus barengoltzii.
ChainA
Resolution1.981 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.41: pullulanase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GLC A D409 R412 D401 R404
BS02 GLC A W381 N471 W373 N463
BS03 GLC A D350 E379 H469 D470 D342 E371 H461 D462
BS04 GLC A Y236 D237 N525 Y228 D229 N517
BS05 GLC A R495 D546 S549 S553 R487 D538 S541 S545
BS06 GLC A S553 F627 G628 E630 S545 F619 G620 E622
BS07 CA A D216 Y217 E224 E245 D208 Y209 E216 E237
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0046872 metal ion binding
GO:0051060 pullulanase activity
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:6jfx, PDBe:6jfx, PDBj:6jfx
PDBsum6jfx
PubMed32355041
UniProtA0A0C5GWS2

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