Structure of PDB 6jer Chain A

Receptor sequence
>6jerA (length=170) Species: 1409923 (Acinetobacter baumannii MRSN 3527) [Search protein sequence]
LLPILSFPDPRLRTIAKPVEEVTDEIRQLAADMFETMYAAPGIGLAASQV
DRHIQLIVMDLSESKDEPMVFINPKVTPLTEETQPYEEGCLSVPQIYDKV
DRPSRVKIEAINLEGQAFEIEADGLLAVCIQHEMDHLNGKLFVDYLSPLK
RQRAREKVEKIVRQREREKV
3D structure
PDB6jer Expression, crystallization, and preliminary X-ray crystallographic analysis of peptide deformylase from Acinetobacter baumanii
ChainA
Resolution2.4 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G46 Q51 C92 L93 H134 E135 H138
Catalytic site (residue number reindexed from 1) G44 Q49 C90 L91 H132 E133 H136
Enzyme Commision number 3.5.1.88: peptide deformylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A C92 H134 H138 C90 H132 H136
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042586 peptide deformylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0018206 peptidyl-methionine modification

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Molecular Function
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Biological Process
External links
PDB RCSB:6jer, PDBe:6jer, PDBj:6jer
PDBsum6jer
PubMed
UniProtB0VNL8|DEF_ACIBS Peptide deformylase (Gene Name=def)

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