Structure of PDB 6jdd Chain A

Receptor sequence
>6jddA (length=176) Species: 1931 (Streptomyces sp.) [Search protein sequence]
NVEKFEGAELHVHVTGSISAALVPWWIHWLREFQPELVVNVSVTPAASRF
LAVRALRHLANGKVWVDSWDDPDVPPEVNSGKSGASECFLVFPATLDTVM
RLAQGRADSPALMMLQLTDAPLVIADTFPGSNEIVENNVQTLKLRPNVEF
APRVEVGFNLPGALAAANRMRKEGRS
3D structure
PDB6jdd Convergent evolution of the Cys decarboxylases involved in aminovinyl-cysteine (AviCys) biosynthesis.
ChainA
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.3.99.36: cypemycin cysteine dehydrogenase (decarboxylating).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A T16 G17 S18 T45 A47 F51 T96 L97 T99 D109 T128 P130 T15 G16 S17 T44 A46 F50 T95 L96 T98 D108 T127 P129
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0016491 oxidoreductase activity
GO:0016831 carboxy-lyase activity
Biological Process
GO:0030651 peptide antibiotic biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6jdd, PDBe:6jdd, PDBj:6jdd
PDBsum6jdd
PubMed30771247
UniProtE5KIB9|CYPD_STRSQ Cypemycin cysteine dehydrogenase (decarboxylating) (Gene Name=cypD)

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