Structure of PDB 6iv5 Chain A

Receptor sequence
>6iv5A (length=334) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
MEWIQSLPKIELHAHLNGSIRDSTLLELARVLGEKGVIVFADVEHVIQKN
DRSLVEVFKLFDLIHKLTTDHKTVTRITREVVEDFALENVVYLELRTTPK
RSDSIGMSKRSYMEAVIQGLRSVSEVDIDFVRKKIYVRLLLSIDRRETTE
SAMETVKLALEMRDVGVVGIDLSGNPLVGEWSTFLPALQYAKDNDLHITL
HCGEVPNPKEIQAMLDFKPHRIGHACFFKDEDWTKLKSFRIPVEICLTSN
IVTKSISSIDIHHFADLYNAKHPLILCTDDFGVFSTSLSNEYALAVRSLG
LSKSETFALARAAIDATFAEDEVKQQLRFIFDSA
3D structure
PDB6iv5 Structure ofArabidopsis thaliana N6-methyl-AMP deaminase ADAL with bound GMP and IMP and implications forN6-methyl-AMP recognition and processing.
ChainA
Resolution1.749 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.5.4.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 PO4 A N17 H65 T97 T98 K100 N17 H65 T97 T98 K100
BS02 ZN A H13 H15 H217 D295 H13 H15 H201 D279
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0019239 deaminase activity
GO:0046872 metal ion binding
GO:0062154 N6-methyl-AMP deaminase activity
Biological Process
GO:0006401 RNA catabolic process
GO:0009117 nucleotide metabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:6iv5, PDBe:6iv5, PDBj:6iv5
PDBsum6iv5
PubMed31318636
UniProtQ8LPL7|ADAL_ARATH N6-mAMP deaminase (Gene Name=MAPDA)

[Back to BioLiP]