Structure of PDB 6ip4 Chain A

Receptor sequence
>6ip4A (length=471) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
DLKWTERLPECPVYRPTKEEFEDPLTYLQKIFPEASKYGICKIVSPLTAT
VPAGAVLMKEKSNFKFTTRVQPLRLAEWDSDDKVTFFMSGRTYTFRDYEK
MANKVFARRYCSGGSLPDSFLEKEFWKEIACGKTETVEYACDVDGSAFSS
APGDPLGSSKWNLNKVSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAW
HVEDHYLYSINYQHCGASKTWYGIPGSAALKFEKVVKECVYNDDILSTNG
EDGAFDVLLGKTTIFPPKTLLDHNVPVYKAVQKPGEFVVTFPRAYHAGFS
HGFNCGEAVNFAMGDWFPFGAIASCRYAHLNRVPLLPHEELICKEAMLLN
SSSKSENLDLTPTELSGQRSIKTAFVHLIRFLHLARWSLMKSGLCTGLVS
NTYGTIVCSLCKRDCYLAFINCECYSHPVCLRHDVKKLDLPCGTTHTLYL
RDNIEDMEAAAMKFEKEDGVS
3D structure
PDB6ip4 The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.
ChainA
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.14.11.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A R161 V176 P274 Y282 N402 R69 V84 P182 Y190 N310
BS02 ZN A C500 C503 H525 C408 C411 H433
BS03 ZN A C514 H519 C534 C422 H427 C442
External links
PDB RCSB:6ip4, PDBe:6ip4, PDBj:6ip4
PDBsum6ip4
PubMed30899015
UniProtF4KIX0|JMJ13_ARATH Lysine-specific demethylase JMJ13 (Gene Name=JMJ13)

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