Structure of PDB 6i8j Chain A

Receptor sequence
>6i8jA (length=362) Species: 457428 (Streptomyces lividans TK24) [Search protein sequence]
GSAVPFHGAHQAGIATPVQDRLHFAAFDVTTEDRAAFVALLKEWTAAARR
LTAGHAVGEGAYGGLPEAPPDDTGEALGLKPSRLTLTIGFGPSLFTRFGL
ADLRPEALADLPKFPGDNLDRARSGGDLCVQACADDPQVAVHAIRNLARI
GFGKVVVRWSQLGFGKTSSTTPDKQTPRNLLGFKDGTRNIAGTEKDRLDR
FVWAAEKDGTPWMTGGSYLVARRIRMHIETWDRASLQEQEDVFGRDKGEG
APVGKAKERDEPFLKAMKPDAHVRLAHPDSNGGATLLRRGYSFTDGTDGL
GRLDAGLFFLAYQRDIRTGFVPVQRNLATDALNEYIQHVGSAVFAVPPGV
RDADDWWGSTLF
3D structure
PDB6i8j Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.
ChainA
Resolution1.9 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM A K238 D239 G240 T241 R242 M280 F297 H326 A330 H331 R342 F363 F374 Q378 L381 L386 K184 D185 G186 T187 R188 M226 F243 H272 A276 H277 R288 F309 F320 Q324 L327 L332
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Dec 1 01:29:02 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6i8j', asym_id = 'A', title = 'Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6i8j', asym_id='A', title='Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0004601,0020037,0033212', uniprot = '', pdbid = '6i8j', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004601,0020037,0033212', uniprot='', pdbid='6i8j', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>