Structure of PDB 6hpd Chain A

Receptor sequence
>6hpdA (length=955) Species: 1347342 (Formosa agariphila KMM 3901) [Search protein sequence]
EVITSSERTTYNFNVDWKFIKSNPKQAQDINYNDATWETISCPHTFNDVD
TFDDLSHGHHDGEDNQWRGTVWYRKHFKLPKDDKGKKVFIEFESVRQIAD
VYINGVHLGQNQTGFIPFGFDLTPHLKFGEENIIAVKVNNDRGDHFRENF
PLVWNHEHWHPTHGGIYRNVFLHTMDPLHITLPLYDNLETVGTYVYAENI
SEKSADITVETEIQNEHAENKNITLVTQIVDNDGAVVAHSNKNVAIPSGQ
KMKVTTVTNIQNPQLWYTRYPYMYKVVSAIKESNKVIDTYESPLGIRNFD
FNKDSGFWINGEQIKLHGWGQKPTNAWAGLGAALPDWLRDFTFKLMDEAG
GNFIRWGHCAASPAEVDMGDKYGFVTLMPGVSGESEDEGETWDIRYKAFK
DLIVYYRNHPSIFIWEGGNWAESEAHYKEILEAIKTFDPKGKRLMGNRRA
DVKNDSEGYVSIEIGTEGWEREYPDLPIIESEYNREEAPRRIWDKNSPDD
NFYNHPNISKNTYKLSSEEFAVRQADHWWNKMGKKAYHSGGANWIFSDGP
HGGRCPTEVTRASGEVDAVRLPKEAFYALKAMWRPEPQVHIVGHWNYEVG
TKKTMYVMSNCASVKLYVNDKLVGTNSNPENGYVFKFDNVAWESGKIKAE
GFIDDALKTTQTKETTGEPAALKLTSITGPEGWLADGSDVALIDVEVVDA
QGRRCPLAKGRVDFTISGPAIWRGGYNSGKPNSTNNLFLDIEAGINRVAV
RSVLESGTVTIMAKKPGFKDVSVTLKSLPIDFNNGLTTTLPQVYTNVLTK
EPLPEHIPEMPESELFRKFSYTGDGKAMLRTNMHWGKKAYTDLEYNYTVL
PRYLNESEYVRTPNSDNRYWARDQLQFIAGKKMHIYVLHDDTVPRPEFLL
RDYEDTGDNVNVVGASMSVFHRVAEEGESIIMAGNSDGDAPENCRMYTVM
VKEFK
3D structure
PDB6hpd A marine bacterial enzymatic cascade degrades the algal polysaccharide ulvan.
ChainA
Resolution2.43 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.31: beta-glucuronidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A N570 W571 I572 S590 E592 N543 W544 I545 S563 E565
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004566 beta-glucuronidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process
Cellular Component
GO:0042597 periplasmic space

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6hpd, PDBe:6hpd, PDBj:6hpd
PDBsum6hpd
PubMed31285597
UniProtT2KN75|PLH17_FORAG Beta-glucuronidase (Gene Name=BN863_22060)

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