Structure of PDB 6gd5 Chain A

Receptor sequence
>6gd5A (length=117) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
VTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIVTQGTIKINADKVVVTRP
GGEQGKEVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDFVVLTGNA
YLQQVDSNIKGDKITYL
3D structure
PDB6gd5 Thanatin targets the intermembrane protein complex required for lipopolysaccharide transport inEscherichia coli.
ChainA
ResolutionN/A
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Q34 P35 I36 H37 I38 E39 S40 D41 Q43 V52 F54 R76 Q81 G82 E84 Q7 P8 I9 H10 I11 E12 S13 D14 Q16 V25 F27 R49 Q54 G55 E57
Gene Ontology
Molecular Function
GO:0001530 lipopolysaccharide binding
Biological Process
GO:0015920 lipopolysaccharide transport
Cellular Component
GO:0042597 periplasmic space

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6gd5, PDBe:6gd5, PDBj:6gd5
PDBsum6gd5
PubMed30443594
UniProtP0ADV1|LPTA_ECOLI Lipopolysaccharide export system protein LptA (Gene Name=lptA)

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