Structure of PDB 6gce Chain A

Receptor sequence
>6gceA (length=158) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWF
AFLGEGQEASNGIYPVILYYKDFDELVLAYGISDTNEPHAQWQFSSDIPK
TIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKL
IFNSGKSV
3D structure
PDB6gce Recognition of modified cytosine variants by the DNA-binding domain of methyl-directed endonuclease McrBC.
ChainA
Resolution1.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.21.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna A S38 G40 Y41 N43 T45 W49 A59 S60 Y64 I82 S83 D84 T85 Y117 S38 G40 Y41 N43 T45 W49 A59 S60 Y64 I82 S83 D84 T85 Y117
BS02 dna A Q21 S22 T23 K24 Y41 G42 N43 Q21 S22 T23 K24 Y41 G42 N43
External links
PDB RCSB:6gce, PDBe:6gce, PDBj:6gce
PDBsum6gce
PubMed30194838
UniProtP15005|MCRB_ECOLI Type IV methyl-directed restriction enzyme EcoKMcrB subunit (Gene Name=mcrB)

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