Structure of PDB 6gaf Chain A

Receptor sequence
>6gafA (length=231) Species: 64091 (Halobacterium salinarum NRC-1) [Search protein sequence]
ITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIA
FTMYLSMLLGYGLTMVPFGGEQNPIYWARYADWLFTTPLLLLDLALLVDA
DQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLF
FGFTSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNI
ETLLFMVLDVSAKVGFGLILLRSRAIFGEAE
3D structure
PDB6gaf Three-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin.
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 RET A W86 T90 M118 W138 S141 T142 M145 W182 Y185 P186 W189 K216 W83 T87 M115 W135 S138 T139 M142 W179 Y182 P183 W186 K213
Gene Ontology
Molecular Function
GO:0005216 monoatomic ion channel activity
GO:0009881 photoreceptor activity
GO:0015454 light-driven active monoatomic ion transmembrane transporter activity
Biological Process
GO:0006811 monoatomic ion transport
GO:0007602 phototransduction
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6gaf, PDBe:6gaf, PDBj:6gaf
PDBsum6gaf
PubMed31320619
UniProtP02945|BACR_HALSA Bacteriorhodopsin (Gene Name=bop)

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