Structure of PDB 6g9q Chain A

Receptor sequence
>6g9qA (length=276) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT
LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVP
LGKEQNYTCRVYHEGLPEPLTLRWEP
3D structure
PDB6g9q Structural basis for CD8+ T cells auto-reactivity in LCMV infection
ChainA
Resolution1.89 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 Y59 E63 K66 Q70 W73 V76 S77 N80 L81 Y84 Q97 S99 Y123 T143 K146 W147 S150 A152 Y156 Y159 E163 W167 Y171 Y7 Y59 E63 K66 Q70 W73 V76 S77 N80 L81 Y84 Q97 S99 Y123 T143 K146 W147 S150 A152 Y156 Y159 E163 W167 Y171
External links
PDB RCSB:6g9q, PDBe:6g9q, PDBj:6g9q
PDBsum6g9q
PubMed
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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