Structure of PDB 6g0c Chain A

Receptor sequence
>6g0cA (length=624) Species: 446 (Legionella pneumophila) [Search protein sequence]
QDKSVPVWNGFSLYTDDTVKAAAQYAYDNYLGKPYTGSVESAPANFGGRM
VYRQHHGLSHTLRTMAYAELIVEEARKAKLRGETLGKFKDGRTIADVTPQ
ELKKIMIAQAFFVAGRDDEASDAKNYQKYHEQSRDAFLKYVKDNESTLIP
DVFKDQEDVNFYARVIEDKSHDWESTPAHVLINQGHMVDLVRVKPPESFL
QRYFSSMQRWIGSQATEAVFGIQRQFFHATYEVVAGFDSDNKEPHLVVSG
LGRYVIGAPKKGQKEGDLKVFPQTYERLMRVDEFLKLPEIQNTFPGSGKH
LQGGMPGMNEMDYWNRLNSLNRARCENDVDFCLKQLQTAHDKAKIEPIKQ
AFQSSKGKERRQPNVDEIAAARIIQQILANPDCIHDDHVLINGQKLEQQF
FRDLLAKCEMAVVGSLLNDTDIGNIDTLMRHEKDTEFHSTNPEAVPVKIG
EYWINDQRIITQKKHDLIFLMQNDAWYFSRVNAIAQNRDKGSTFKEVLIT
TLMTPLTSKALVDTSQPPTRLFRGLNLSEEFTKGLIDQANAMIANTTERL
FTDNASTTTEIKLVKETWDSNVIFEMLDPDGLLHEFSVYLPEDVALVPVK
VTLDGKTQKGENRYVFTFVAVKSP
3D structure
PDB6g0c Insights into catalysis and function of phosphoribosyl-linked serine ubiquitination.
ChainA
Resolution2.802 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.3.2.-
2.4.2.31: NAD(+)--protein-arginine ADP-ribosyltransferase.
3.4.22.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 1PS A W394 N404 W432 W173 N183 W210
Gene Ontology
Molecular Function
GO:0106274 NAD+-protein-arginine ADP-ribosyltransferase activity

View graph for
Molecular Function
External links
PDB RCSB:6g0c, PDBe:6g0c, PDBj:6g0c
PDBsum6g0c
PubMed29795347
UniProtQ5ZTK4|SDEA_LEGPH Ubiquitinating/deubiquitinating enzyme SdeA (Gene Name=sdeA)

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