Structure of PDB 6fql Chain A

Receptor sequence
>6fqlA (length=390) Species: 7955 (Danio rerio) [Search protein sequence]
SSGAFATASKAHGEGIKRALQGKPASFTVVGYDHDGEPRLSGGDSVSVVL
MSPDGNLSSAEVSDHQDGTYTVSYLPKGEGEHLLSVLICNQHIEGSPFKV
MVKSGRSYGGVGLPMASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNN
RVQIFKPCGTFHHKFGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQ
IFTFDGQFLLKFGEKGTKNGQFNYPWDVAVNFEGKILVSDTRNHRVQLFG
PDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPDC
QSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFL
CKFGTHGNGFGQMDRPSGIAVTPDGVIVAVDFGNNRILMF
3D structure
PDB6fql Evolutionary plasticity of the NHL domain underlies distinct solutions to RNA recognition.
ChainA
Resolution2.349 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A C563 R564 R581 S582 R611 K628 D629 Y658 R676 R707 F722 R752 R770 C129 R130 R147 S148 R177 K194 D195 Y224 R242 R273 F288 R318 R336
External links
PDB RCSB:6fql, PDBe:6fql, PDBj:6fql
PDBsum6fql
PubMed29674686
UniProtE7FAM5|LIN41_DANRE E3 ubiquitin-protein ligase TRIM71 (Gene Name=trim71)

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