Structure of PDB 6fop Chain A

Receptor sequence
>6fopA (length=717) Species: 203119 (Acetivibrio thermocellus ATCC 27405) [Search protein sequence]
QYYREGTGSYTVVLPPGAKVPQAEIYKTSNLQGAVPTNSWESSILWNQYS
LPIYAHPLTFKFKAEGIEVGKPALGGSGIAYFGAHKNDFTVGHSSVYTFP
DARADKISDFAVDAVMASGSGSIKATLMKGSPYAYFVFTGGNPRIDFSGT
PTVFYGDSGSQCLGVTINGVNYGLFAPSGSKWQGIGTGTITCILPAGKNY
FSIAVLPDNTVSTLTYYKDYAYCFVTDTKVEWSYNETESTLTTTFTAEVS
VKEGTNKGTILALYPHQWRNNPHILPLPYTYSTLRGIMKTIQGTSFKTVY
RYHGILPNLPDKGTYDREALNRYINELALQADAPVAVDTYWFGKHLGKLS
CALPIAEQLGNISAKDRFISFMKSSLEDWFTAKEGETAKLFYYDSNWGTL
IGYPSSYGSDEELNDHHFHYGYFLHAAAQIALRDPQWASRDNWGAMVELL
IKDIANWDRNDTRFPFLRNFDPYEGHSWASGHAGFADGNNQASSSEAINA
WQAIILWGEATGNKTIRDLGIYLYTTEVEAVCNYWFDLYKDIFSPSYGHN
YASMVWGGKYCHEIWWNGTNSEKHGINFLPITAASLYLGKDPNYIKQNYE
EMLRECGTSQPPNWKDIQYMYYALYDPAAAKNMWNESIVPEDGESKAHTY
HWICNLDSLGLPDFSVTADTPLYSVFNKNNIRTYVVYNASSSAKKVTFSD
GKVMTVGPHSMAVSTGS
3D structure
PDB6fop Novel insights into the degradation of beta-1,3-glucans by the cellulosome of Clostridium thermocellum revealed by structure and function studies of a family 81 glycoside hydrolase.
ChainA
Resolution1.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.39: glucan endo-1,3-beta-D-glucosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A L490 R491 F493 L467 R468 F470
BS02 CA A D401 T404 E409 K412 D378 T381 E386 K389
BS03 CA A D401 E409 D378 E386
BS04 MG A Y49 I67 N70 Q71 Y72 A125 Y26 I44 N47 Q48 Y49 A102
BS05 MG A K654 N655 W657 K631 N632 W634
BS06 MG A D169 F170 G211 D146 F147 G188
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0005509 calcium ion binding
GO:0016151 nickel cation binding
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0042973 glucan endo-1,3-beta-D-glucosidase activity
GO:0046872 metal ion binding
GO:0052861 endo-1,3(4)-beta-glucanase activity
Biological Process
GO:0000272 polysaccharide catabolic process
GO:0071555 cell wall organization
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6fop, PDBe:6fop, PDBj:6fop
PDBsum6fop
PubMed29870811
UniProtA3DD66|ENG1_ACET2 Glucan endo-1,3-beta-D-glucosidase (Gene Name=Lam81A)

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