Structure of PDB 6f9j Chain A

Receptor sequence
>6f9jA (length=485) Species: 4513 (Hordeum vulgare) [Search protein sequence]
VKGNYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWW
GLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIP
IPQWVRDVGTRDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYAD
YMTSFRENMKEFLDAGVIVDIEVGLGPAGEMRYPSYPQSHGWSFPGIGEF
ICYDKYLQADFKAAAAAVGHPEWEFPNDVGQYNDTPERTQFFRDNGTYLS
EKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYKVP
SHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSSQAM
SAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQS
GPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMHANLPRDPYVDPMAP
LPRSGPEISIEMILQAAQPKLQPFPFQEHTDLPVG
3D structure
PDB6f9j Synthesis, biological and structural analysis of prospective glycosyl-iminosugar prodrugs: impact on germination
ChainA
Resolution1.67 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.2: beta-amylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NOJ A E184 E378 A380 E180 E374 A376
BS02 MAN A L18 D51 H91 A182 R418 L14 D47 H87 A178 R414
Gene Ontology
Molecular Function
GO:0016161 beta-amylase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0000272 polysaccharide catabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6f9j, PDBe:6f9j, PDBj:6f9j
PDBsum6f9j
PubMed
UniProtA8CFR3

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