Structure of PDB 6ede Chain A

Receptor sequence
>6edeA (length=178) Species: 203119 (Acetivibrio thermocellus ATCC 27405) [Search protein sequence]
IDYSKLSKEVAYALRHAPWEYGLELDAEGWVDINQLLSSLHESEKWKKVS
EHDLHVMIEKSDKKRYEISNGKIRALYGHSIPQRIIKEQKCPPEVLYHGT
ARRFVKSIKEKGLQPQGRQYVHLSADVETALQVGKRRDIKPVLLIVNALE
AWSEGIKFYLGNDKVWLADAIPSKYIRF
3D structure
PDB6ede Structure of tRNA splicing enzyme Tpt1 illuminates the mechanism of RNA 2'-PO4recognition and ADP-ribosylation.
ChainA
Resolution1.553 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HQG A R18 K66 R68 Y80 H101 T103 F107 S110 I111 L116 Q117 Q119 R121 H125 V136 R139 R140 R15 K63 R65 Y77 H98 T100 F104 S107 I108 L113 Q114 Q116 R118 H122 V133 R136 R137
Gene Ontology
Molecular Function
GO:0000215 tRNA 2'-phosphotransferase activity
GO:0003950 NAD+-protein poly-ADP-ribosyltransferase activity
GO:0008168 methyltransferase activity
GO:0016740 transferase activity
GO:0016772 transferase activity, transferring phosphorus-containing groups
Biological Process
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation

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Molecular Function
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Biological Process
External links
PDB RCSB:6ede, PDBe:6ede, PDBj:6ede
PDBsum6ede
PubMed30644400
UniProtA3DJX6|KPTA_ACET2 Probable RNA 2'-phosphotransferase (Gene Name=kptA)

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