Structure of PDB 6dmf Chain A

Receptor sequence
>6dmfA (length=513) Species: 411476 (Bacteroides ovatus ATCC 8483) [Search protein sequence]
IDPNAQLTTAQLQTYGDLSMMEIYRNYHYAFTQQLMGCWNTTNYGGRHTL
DNNEMSRIWTSFYTQSLKNIIDAQYRTAEDAEKVNINSVLRIYRVYLMSI
ITDTYGDAPFSEAGFNPKYDKQEDIYNAFFLELEDAVNKIDPTKDKVTGD
LIYAGDVTKWQQLANSLRLRFAMRISSVNPTKAQTEFENALAANGGVITD
ASSDALIKYMTIAFSFGQEAYSDYRGNSLSQLLFGNDPANNPSYLCSTFF
NQLYNSGDPRTFKISRCYYDGLMSATSPDNRVDITQEMIEKGIAFSPRDP
GAYSWEPWPTGYDSDICAELAVNNPSVTATMAREVEPKLANNFLKSDNPG
VVMTSAEVKFLMAEATVKKWNVGSVSAEDLYKQGVRAAIDFLTDNYGCTA
TTDAEFDAFIQDKGAFGHTDNQKLEAINTQAWILHFTNPAECWANVRRSG
YPKLKSPAEYGFGQYLTGGTEIPVRLCYPVLESSYNKKSYNEAIERMGGT
DNWHSLLWWDTEN
3D structure
PDB6dmf Surface glycan-binding proteins are essential for cereal beta-glucan utilization by the human gut symbiont Bacteroides ovatus.
ChainA
Resolution2.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC A E60 R95 E22 R57
BS02 BGC A E60 N78 N281 E22 N40 N236
BS03 BGC A W77 D282 W39 D237
BS04 BGC A N369 S371 N324 S326
BS05 MG A R492 D555 E557 R447 D510 E512
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