Structure of PDB 6djx Chain A

Receptor sequence
>6djxA (length=317) Species: 27457 (Bactrocera dorsalis) [Search protein sequence]
YLGGSLSIYIKTNTGRTLSVNLEPQWDIKNVKEIVAPQLGLQPEEVKIIF
AGKELSDATTIQECDLGQQSILHAIRSRHFFVHCAQCNKLCKGKLRVRCS
LCKGGAFTVHRDPECWDDVLKPRRITGHCESQEIACFDNETGDPPFTEFY
FKCGEHVSGGEKDFAAPLNLIKINIKDVPCLACTEVSETVLVFPCESKHV
TCLECFEQYCRSRLSERQFMPHPDIGYTLPCPAGCENSFIEEIHHFKLLS
REEYARYQRFATEEYVLQAGGVLCPQPGCGMGLLVEPECKKVTCQNGCGY
VFCRNCLQGYHLGDCLP
3D structure
PDB6djx Mechanism of parkin activation by phosphorylation.
ChainA
Resolution4.801 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.3.2.31: RBR-type E3 ubiquitin transferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A C192 C222 C99 C129
BS02 ZN A C177 C180 C246 H249 C84 C87 C153 H156
BS03 ZN A C273 C276 C298 C180 C183 C205
BS04 ZN A C288 H292 C324 C328 C195 H199 C231 C235
BS05 ZN A C396 C399 H404 C408 C303 C306 H311 C315
BS06 ZN A C367 C372 C387 C391 C274 C279 C294 C298
Gene Ontology
Molecular Function
GO:0004842 ubiquitin-protein transferase activity
GO:0008270 zinc ion binding
Biological Process
GO:0016567 protein ubiquitination
Cellular Component
GO:0005739 mitochondrion
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6djx, PDBe:6djx, PDBj:6djx
PDBsum6djx
PubMed29967542
UniProtA0A034W4L8

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