Structure of PDB 6cf3 Chain A

Receptor sequence
>6cf3A (length=332) Species: 319 (Pseudomonas savastanoi pv. phaseolicola) [Search protein sequence]
LQTFELPTEVTGCAADISLGRALIQAWQKDGIFQIKTDSEQDRKTQEAMA
ASKQFCKEPLTFKSSCVSDLTYSGYVASGEEVTAGKPDFPEIFTVCKDLS
VGDQRVKAGWPCHGPVPWPNNTYQKSMKTFMEELGLAGERLLKLTALGFE
LPINTFTDLTRDGWHHMRVLRFPPQTSTLSRGIGAHTDYGLLVIAAQDDV
GGLYIRPPVEGEKRNRNWLPGESSAGMFEHDEPWTFVTPTPGVWTVFPGD
ILQFMTGGQLLSTPHKVKLNTRERFACAYFHEPNFEASAYPLFEPSANER
IHAGEHFTNMFMRCYPDRITTQRINKENRLAH
3D structure
PDB6cf3 tba
ChainA
Resolution1.12 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.13.12.19: 2-oxoglutarate dioxygenase (ethylene-forming).
1.14.20.7: 2-oxoglutarate/L-arginine monooxygenase/decarboxylase (succinate- forming).
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MN A H189 D191 H268 H186 D188 H265
BS02 AKG A R171 L173 F175 H189 H268 V270 R277 R168 L170 F172 H186 H265 V267 R274
Gene Ontology
Molecular Function
GO:0016706 2-oxoglutarate-dependent dioxygenase activity
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
GO:0102276 2-oxoglutarate oxygenase/decarboxylase (ethylene-forming) activity
Biological Process
GO:0009693 ethylene biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:6cf3, PDBe:6cf3, PDBj:6cf3
PDBsum6cf3
PubMed38577885
UniProtP32021|EFE_PSESH 2-oxoglutarate-dependent ethylene/succinate-forming enzyme (Gene Name=efe)

[Back to BioLiP]