Structure of PDB 6cdp Chain A

Receptor sequence
>6cdpA (length=221) Species: 10090 (Mus musculus) [Search protein sequence]
QVQLQQSGADLVRPGASVTLSCKASGYTFTDYEMHWMKQTPVHGLEWIGA
IVPETGYTAYNQKFKGKAILTADKSSNTVYMQFRSLTSEDSAVYYCSRLK
LLGYFDVWGTGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY
FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYI
CNVNHKPSNTKVDKKVEPKSC
3D structure
PDB6cdp Epitope-based vaccine design yields fusion peptide-directed antibodies that neutralize diverse strains of HIV-1.
ChainA
Resolution2.456 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A T30 D31 E33 E54 Y57 L99 L101 L102 G103 T30 D31 E33 E54 Y57 L99 L101 L102 G103
External links