Structure of PDB 6c6j Chain A

Receptor sequence
>6c6jA (length=266) Species: 10090 (Mus musculus) [Search protein sequence]
NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQG
KLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEM
YPGSESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSA
TVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPHRQLVCHVSGF
YPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLAC
RVKHSSLGGQDIILYW
3D structure
PDB6c6j A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides.
ChainA
Resolution1.79 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FUC A S114 W129 G130 S106 W121 G122
BS02 J76 A Y73 S76 D80 L150 D153 T156 Y67 S70 D74 L142 D145 T148
External links
PDB RCSB:6c6j, PDBe:6c6j, PDBj:6c6j
PDBsum6c6j
PubMed31391251
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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