Structure of PDB 6c6f Chain A

Receptor sequence
>6c6fA (length=263) Species: 10090 (Mus musculus) [Search protein sequence]
NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQG
KLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEM
YSESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATV
QMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVHRQLVCHVSGFYPK
PVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACRVK
HSSLGGQDIILYW
3D structure
PDB6c6f Structure-function analysis of sphingamides
ChainA
Resolution1.67 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FUC A S114 W129 G130 S104 W119 G120
BS02 ELS A L66 F70 Y73 S76 D80 I98 L100 F120 L150 D153 T156 F171 L60 F64 Y67 S70 D74 I92 L94 F110 L140 D143 T146 F161
External links
PDB RCSB:6c6f, PDBe:6c6f, PDBj:6c6f
PDBsum6c6f
PubMed
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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