Structure of PDB 6bnl Chain A

Receptor sequence
>6bnlA (length=255) Species: 10090 (Mus musculus) [Search protein sequence]
KNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQ
GKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCE
MYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQG
TSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPVCHVSGFY
PKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLLACRVKHSSLGGQ
DIILY
3D structure
PDB6bnl Dual Modifications of alpha-Galactosylceramide Synergize to Promote Activation of Human Invariant Natural Killer T Cells and Stimulate Anti-tumor Immunity.
ChainA
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 QWV A S28 M69 F70 Y73 S76 F77 D80 W133 D153 G155 T156 T159 F171 S23 M64 F65 Y68 S71 F72 D75 W128 D148 G150 T151 T154 F166 PDBbind-CN: -logKd/Ki=6.96,Kd=110nM
External links
PDB RCSB:6bnl, PDBe:6bnl, PDBj:6bnl
PDBsum6bnl
PubMed29576533
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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