Structure of PDB 6b0x Chain A

Receptor sequence
>6b0xA (length=284) Species: 53369 (Dubowvirus dv80alpha) [Search protein sequence]
PDNVMMHEKKDGTLMNEFTTPILQEVMENSKIMQLGKYEPMEGTEKKFTF
WADKPGAYWVGEGQKIETSKATWVNATMRAFKLGVILPVTKEFLNYTYSQ
FFEEMKPMIAEAFYKKFDEAGILNQGNNPFGKSIAQSIEKTNKVIKGDFT
QDNIIDLEALLEDDELEANAFISKTQNRSLLRKIVDPETKERIYDRNSDS
LDGLPVVNLKSSNLKRGELITGDFDKLIYGIPQLIEYKIDETAQLSTVKN
EDGTPVNLFEQDMVALRATMHVALHIADDKAFAK
3D structure
PDB6b0x Competing scaffolding proteins determine capsid size during mobilization ofStaphylococcus aureuspathogenicity islands.
ChainA
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A Q49 E53 M58 Q59 L60 G61 K62 Y63 N194 P230 I253 Q24 E28 M33 Q34 L35 G36 K37 Y38 N169 P205 I228
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6b0x, PDBe:6b0x, PDBj:6b0x
PDBsum6b0x
PubMed28984245
UniProtA4ZFB3|CAPSD_BP80A Major capsid protein (Gene Name=gp47)

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