Structure of PDB 6amk Chain A
Receptor sequence
>6amkA (length=52) Species:
54571
(Streptomyces venezuelae) [
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PPLLTPAEVATMFRVDPKTVTRWAKAGKLTSIRTMGGHRRYREAEVRALM
AG
3D structure
PDB
6amk
The MerR-like protein BldC binds DNA direct repeats as cooperative multimers to regulate Streptomyces development.
Chain
A
Resolution
3.288 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
dna
A
P14 A15 K26 T29 H46 R47
P6 A7 K18 T21 H38 R39
PDBbind-CN
: Kd=16.5nM
BS02
dna
A
D24 T27 R30 W31 T42 G44 H46
D16 T19 R22 W23 T34 G36 H38
PDBbind-CN
: Kd=16.5nM
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6amk
,
PDBe:6amk
,
PDBj:6amk
PDBsum
6amk
PubMed
29556010
UniProt
F2REK9
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