Structure of PDB 6a2d Chain A

Receptor sequence
>6a2dA (length=519) Species: 35974 (Santalum album) [Search protein sequence]
NYPPNLWDYEFLQSLGDVEEKHLKLADKLKEEVKSLIKQTMEPLTKLEFI
DTVRRLGLKYQFETEVKEAVVMVSKYENDAWWIDNLHATSLRFRIMRENG
IFVPQDVFERFKDTDGFKNQLCEDVKGLLSLYEASFLGWEGEDILDEART
FATSKLKSIEGKIPSPSLAKKVSHALDLPLHWRTIRYEARWFIDTYEEEE
DVNLTLLRYAKLDFNIVQSFHQKEIGRLSRWWVGTGLDKMPFARNGLIQS
YMYAIGMLFEPNLGEVREMEAKVGALITTIDDVYDVYGTMEELELFTDIT
NRWDISKADQLPRNIRMPLLTMFNTSNDIGYWALKERGFNGIPCTAKVWS
DQLKSYTKEAKWFHEGHKPTLEEYLDNALVSIGFPNLLVTSYLLTVENPT
KEKLDYVNSLPLFVRASCILCRIINDLGTSPDDNLKSIQCYMNEAGASQE
VAREHIEGLVRMWWKRLNKCLFEPSPFAEPFLSFTVNVVRGSHFFYQYAE
SWTKKQGMSVLIHPIPLNE
3D structure
PDB6a2d Crystal structure of a synthase 2 from santalum album
ChainA
Resolution1.96 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) R279 Y288 G309 D316 D320 S416 I417 G418 R457 N460 T464 Y536
Catalytic site (residue number reindexed from 1) R244 Y253 G274 D281 D285 S381 I382 G383 R422 N425 T429 Y496
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 6R2 A Y288 G309 I312 D316 L422 R457 N460 K476 Y536 Y253 G274 I277 D281 L387 R422 N425 K436 Y496
BS02 MG A D316 D320 D281 D285
BS03 MG A D316 D320 D281 D285
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0010333 terpene synthase activity
GO:0016829 lyase activity
GO:0046872 metal ion binding
Biological Process
GO:0016102 diterpenoid biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6a2d, PDBe:6a2d, PDBj:6a2d
PDBsum6a2d
PubMed
UniProtA0A0A0RCB5

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