Structure of PDB 5zmp Chain A

Receptor sequence
>5zmpA (length=305) Species: 374982 (Picosynechococcus sp. PCC 73109) [Search protein sequence]
MIHLIYSDQFLDHGTGRSHPESARRLTAIAQALKAVSWANQIQWHEPTAI
AFRDPLPWVRQLHDDYYLKELQKLAESGGGYWDPDTPVSPQSFDVALLAV
NACLDGVDLALQTKEPVFALVRPPGHHATRSTGMGFCLLGNVAIAAHYAL
GLAGIKKVAILDWDVHHGNGTEYLVEENPQIIYCSLHQDPAYPGTGQAHH
HGRHQNILNIPLKPGADRRIYVQKFQDVVLPYLQEFQPDLLIVSAGYDAT
AKDPLAGMNLQPQDYKVFSEFCQQLPCPILFALEGGYHLQTLAESVVATL
EPFAQ
3D structure
PDB5zmp The structure of a lysine deacylase
ChainA
Resolution2.19 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A D164 H166 D248 D164 H166 D248
Gene Ontology
Molecular Function
GO:0004407 histone deacetylase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0000122 negative regulation of transcription by RNA polymerase II
GO:0006338 chromatin remodeling

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5zmp, PDBe:5zmp, PDBj:5zmp
PDBsum5zmp
PubMed
UniProtB1XMP1

[Back to BioLiP]