Structure of PDB 5zjt Chain A

Receptor sequence
>5zjtA (length=63) Species: 7227 (Drosophila melanogaster) [Search protein sequence]
LHEWTGKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVK
IWFQNRRMKNKKN
3D structure
PDB5zjt Intrinsic DNA Shape Accounts for Affinity Differences between Hox-Cofactor Binding Sites.
ChainA
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A K22 R23 Q68 R71 M72 K75 K8 R9 Q54 R57 M58 K61
BS02 dna A R23 P25 Y26 R61 Q62 I65 N69 K73 R9 P11 Y12 R47 Q48 I51 N55 K59
Gene Ontology
Molecular Function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:5zjt, PDBe:5zjt, PDBj:5zjt
PDBsum5zjt
PubMed30157419
UniProtP09087|ABDB_DROME Homeobox protein abdominal-B (Gene Name=Abd-B)

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