Structure of PDB 5zjs Chain A

Receptor sequence
>5zjsA (length=58) Species: 7227 (Drosophila melanogaster) [Search protein sequence]
WKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQN
RRMKNKKN
3D structure
PDB5zjs Intrinsic DNA Shape Accounts for Affinity Differences between Hox-Cofactor Binding Sites.
ChainA
Resolution2.896 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A K22 R23 Y43 Q68 R71 M72 K75 K3 R4 Y24 Q49 R52 M53 K56
BS02 dna A K21 R23 Y26 R61 I65 N69 K73 K2 R4 Y7 R42 I46 N50 K54
Gene Ontology
Molecular Function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:5zjs, PDBe:5zjs, PDBj:5zjs
PDBsum5zjs
PubMed30157419
UniProtP09087|ABDB_DROME Homeobox protein abdominal-B (Gene Name=Abd-B)

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