Structure of PDB 5zc7 Chain A

Receptor sequence
>5zc7A (length=182) Species: 273123 (Yersinia pseudotuberculosis IP 32953) [Search protein sequence]
SKTAQQLKYIKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIELLSEH
YSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYE
LEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVH
AAFIINLPELGGEARLTQQGIHCYSLVSFDGH
3D structure
PDB5zc7 Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis
ChainA
Resolution2.0 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) R70 E107
Catalytic site (residue number reindexed from 1) R65 E102
Enzyme Commision number 2.4.2.7: adenine phosphoribosyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADE A L31 F32 R33 L132 L162 H187 L26 F27 R28 L127 L157 H182
Gene Ontology
Molecular Function
GO:0003999 adenine phosphoribosyltransferase activity
GO:0016757 glycosyltransferase activity
Biological Process
GO:0006166 purine ribonucleoside salvage
GO:0006168 adenine salvage
GO:0009116 nucleoside metabolic process
GO:0044209 AMP salvage
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5zc7, PDBe:5zc7, PDBj:5zc7
PDBsum5zc7
PubMed
UniProtQ66DQ2|APT_YERPS Adenine phosphoribosyltransferase (Gene Name=apt)

[Back to BioLiP]