Structure of PDB 5zbc Chain A

Receptor sequence
>5zbcA (length=413) Species: 243365 (Chromobacterium violaceum ATCC 12472) [Search protein sequence]
SSDICIVGAGISGLTCASHLLDSPACRGLSLRIFDMQQEAGGRIRSKMLD
GKASIELGAGRYSPQLHPHFQSAMQHYSQKSEVYPFTQLKFKSHVQQKLK
RAMNELSPRLKEHGKESFLQFVSRYQGHDSAVGMIRSMGYDALFLPDISA
EMAYDIVGKHPEIQSVTDNDANQWFAAETGFAGLIQGIKAKVKAAGARFS
LGYRLLSVRTGDGYLLQLAGDDGWKLEHRTRHLILAIPPSAMAGLNVDFP
EAWSGARYGSLPLFKGFLTYGEPWWLDYKLDDQVLIVDNPLRKIYFKGDK
YLFFYTDSEMANYWRGCVAEGEDGYLEQIRTHLASALGIVRERIPQPLAH
VHKYWAHGVEFCRDSDIDHPSALSHRDSGIIACSDAYTEHAGWMEGGLLS
AREASRLLLQRIA
3D structure
PDB5zbc Protein engineering for improving the thermostability of tryptophan oxidase and insights from structural analysis.
ChainA
Resolution2.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.4.3.23: 7-chloro-L-tryptophan oxidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A G20 I21 S22 D45 M46 G52 R53 G68 A69 G70 R71 R214 L215 I248 A252 L274 Y316 W366 G369 D396 G403 W404 M405 G10 I11 S12 D35 M36 G42 R43 G58 A59 G60 R61 R204 L205 I237 A241 L263 Y305 W355 G358 D385 G392 W393 M394
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0017000 antibiotic biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5zbc, PDBe:5zbc, PDBj:5zbc
PDBsum5zbc
PubMed30053101
UniProtQ9S3V1|VIOA_CHRVO Flavin-dependent L-tryptophan oxidase VioA (Gene Name=vioA)

[Back to BioLiP]