Structure of PDB 5z16 Chain A

Receptor sequence
>5z16A (length=735) Species: 470 (Acinetobacter baumannii) [Search protein sequence]
KSTIIYTLTDEAPLLATYSLLPIIETFTKPAGIEIVKSDISVAARVLAEF
ADYLSEEQKVSDNLAELGRLTQDPDTNIIKLPNISASVAQLTACIKELQS
KGYAIPDYPENPATEEEKTIKARYGKCLGSAVNPVLREGNSDRRAPAAVK
NYAKKHPHSMSEWKQWSQTHVSHMEEGDFYHGEKSMTLDRPRNVKMELIT
NSGKSIVLKPKVALQEGEIIDSMFMSKKALCDFYEKQLDDCREAGILFSL
HVKATMMKVSHPIVFGHCVKIYYKEAFEKHGKLFDELGINVNNGMAGLYE
KIETLPTSLREEIIEDLHACQEHRPALAMVDSAKGITNFHSPNDIIVDAS
MPAMIRAGGKMWGADGKQYDAKAVMPESTFARIYQEMINFCKWHGNFDPK
TMGTVPNVGLMAQKAEEYGSHDKTFEIPEAGIANITDLDTGEVLLTQNVE
EGDIWRMCQVKDAPIRDWVKLAVTRARNSGMPAIFWLDPYRPHENELIKK
VQKYLKDHDTTGLDIQIMSQVRAMRYTLERVVRGLDTISVTGNILRDYLT
DLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEENHLRW
DSLGEFLALAVSLEEMGIKENNARTKLLAKTLDEATGKLLDNDKSPSRRT
GELDNRGSHFYLSLYWAEALAAQNEDAELKAKFAPLAKALAENEQKIVAE
LAQVQGKPADIGGYYAVDPAKVSAVMRPSATFNAA
3D structure
PDB5z16 A novel dimeric isocitrate dehydrogenase from Acinetobacter baumannii
ChainA
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.1.1.42: isocitrate dehydrogenase (NADP(+)).
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG A D352 D551 D555 D348 D547 D551
Gene Ontology
Molecular Function
GO:0004450 isocitrate dehydrogenase (NADP+) activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0006097 glyoxylate cycle
GO:0006099 tricarboxylic acid cycle

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5z16, PDBe:5z16, PDBj:5z16
PDBsum5z16
PubMed
UniProtV5VCI0

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