Structure of PDB 5yvz Chain A

Receptor sequence
>5yvzA (length=294) Species: 481448 (Methylacidiphilum infernorum V4) [Search protein sequence]
QPIIQFDAESWEAEFTQEIQDKAIEGLESGSVLFFPKLNFPLLTEELKFL
DPTWVSNISYDPRSATLKGVEGKSEDLRLLSGLLKRYAEKTAAFLHLLFP
FYGSSLKIARTSFRPVEISGRATSARKDDTRLHVDAFPSSPTGGERILRV
FSNINPQGKPRSWRIGEPFQNYLNHLLPQLSPPAPGKRFLLYLFGITKGY
RSLYDHYMLELHDKGKLDLEYQKNSPQVAFDFPAGSTWIVFTDQVLHAVD
KGQFLLEQTFHLKVNALKHPEKSPLKLLETALNKKLVSSESFKL
3D structure
PDB5yvz Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO).
ChainA
Resolution1.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE A H146 D148 H260 H133 D135 H247
BS02 AKG A R127 D142 H146 D148 R162 R174 W176 H260 V262 R114 D129 H133 D135 R149 R161 W163 H247 V249
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5yvz, PDBe:5yvz, PDBj:5yvz
PDBsum5yvz
PubMed30092253
UniProtB3DUR4

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