Structure of PDB 5yvr Chain A

Receptor sequence
>5yvrA (length=403) Species: 1698264 (candidate division MSBL1 archaeon SCGC-AAA259E19) [Search protein sequence]
HMRMEFRHNLPSSDIIFGSGTLEKIGEETKKWGDKAILVTGKSNMKKLGF
LADAIDYLESAGVETVHYGEIEPNPTTTVVDEGAEIVLEEGCDVVVALGG
GSSMDAAKGIAMVAGHSAEERDISVWDFAPEGDKETKPITEKTLPVIAAT
STSGTGSHVTPYAVITNPETKGKPGFGNKHSFPKVSIVDIDILKEMPPRL
TAITGYDVFSHVSENLTAKGDHPTADPLAIRAIEYVTEYLLRAVEDGEDI
KAREKMAVADTYAGLSNTISGTTLRHAMAAPISGYYPDISHGQALASISV
PIMEHNIENGDEKTWERYSRIAVALDASKPVDNTRQAASKAVDGLKNLLR
SLDLDKPLSELGVEEEKIPEMTEGAFIYMGGGIEANPVDVSKEDVKEIFR
KSL
3D structure
PDB5yvr Identification and Experimental Characterization of an Extremophilic Brine Pool Alcohol Dehydrogenase from Single Amplified Genomes
ChainA
Resolution1.896 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN A D204 H208 H273 H288 D207 H211 H276 H291
BS02 NDP A G38 S40 N41 M42 G97 G98 S99 D102 S148 T149 T152 T157 Y159 V161 K170 E192 M193 L197 D204 H208 H288 G41 S43 N44 M45 G100 G101 S102 D105 S151 T152 T155 T160 Y162 V164 K173 E195 M196 L200 D207 H211 H291
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004022 alcohol dehydrogenase (NAD+) activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5yvr, PDBe:5yvr, PDBj:5yvr
PDBsum5yvr
PubMed29188989
UniProtA0A133UP32

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