Structure of PDB 5yq7 Chain A
Receptor sequence
>5yq7A (length=36) Species:
120962
(Roseiflexus castenholzii) [
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PFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLR
3D structure
PDB
5yq7
Cryo-EM structure of the RC-LH core complex from an early branching photosynthetic prokaryote.
Chain
A
Resolution
4.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
BCL
A
A23 H27 F36
A19 H23 F32
BS02
KGD
A
L24 H27
L20 H23
BS03
BCL
A
T16 L20 H27 W38
T12 L16 H23 W34
BS04
KGD
A
T16 L18 G19 M22 I26
T12 L14 G15 M18 I22
Gene Ontology
Molecular Function
GO:0042314
bacteriochlorophyll binding
GO:0045156
electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872
metal ion binding
Biological Process
GO:0019684
photosynthesis, light reaction
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
GO:0019866
organelle inner membrane
GO:0030076
light-harvesting complex
GO:0030077
plasma membrane light-harvesting complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:5yq7
,
PDBe:5yq7
,
PDBj:5yq7
PDBsum
5yq7
PubMed
29674684
UniProt
Q83XD1
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