Structure of PDB 5yps Chain A

Receptor sequence
>5ypsA (length=202) Species: 1408658 (Pneumocystis carinii B80) [Search protein sequence]
TTSLDEVADIELEFEKADVELLKHQVELFNPLYEKRAMVLRKIPKFWPIA
IEAAPSDELSVYISPEDANVLEHLIDLRVYRPNEDPRDIKIVFEFEANEY
LESNSLYLMKLFRYSSQKAEASSSNINKEPSQLISEKVNIEWKKNKDLTR
QTKGTAPSFFTWFSWTGKENDIFEDEEELAIFIAEDLYPNAVKYFTDALQ
EN
3D structure
PDB5yps Structural basis for the acetylation of histone H3K9 and H3K27 mediated by the histone chaperone Vps75 inPneumocystis carinii.
ChainA
Resolution2.097 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA A D189 F191 E192 D171 F173 E174
BS02 CA A E147 E192 D193 E196 E129 E174 D175 E178
BS03 CA A E192 E194 E174 E176
Gene Ontology
Molecular Function
GO:0003682 chromatin binding
GO:0042393 histone binding
GO:0046872 metal ion binding
Biological Process
GO:0006334 nucleosome assembly
Cellular Component
GO:0000785 chromatin
GO:0005634 nucleus

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5yps, PDBe:5yps, PDBj:5yps
PDBsum5yps
PubMed31098304
UniProtA0A0W4ZF97

[Back to BioLiP]