Structure of PDB 5ymx Chain A

Receptor sequence
>5ymxA (length=202) Species: 246197 (Myxococcus xanthus DK 1622) [Search protein sequence]
SFINYSSREINCKIVYYGPGLCGKTTNLQYIYNKTAAETKGKLISLSTET
DRTLFFDFLPLSLGEIRGFKTRFHLYTVPGQVFYDASRKLILKGVDGVVF
VADSQIERMEANMESLENLRINLAEQGYDLNKIPYVIQYNKRDLPNAVTV
EEMRKALNHRNIPEYQAVAPTGVGVFDTLKAVAKLVLTELKKGGGSHHHH
HH
3D structure
PDB5ymx Allosteric regulation of a prokaryotic small Ras-like GTPase contributes to cell polarity oscillations in bacterial motility.
ChainA
Resolution1.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.5.2: small monomeric GTPase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GDP A L22 C23 G24 K25 T26 T27 G81 N141 K142 D144 L145 V169 P171 L21 C22 G23 K24 T25 T26 G80 N140 K141 D143 L144 V168 P170 PDBbind-CN: -logKd/Ki=6.92,Kd=0.12uM
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
Biological Process
GO:0032880 regulation of protein localization
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5ymx, PDBe:5ymx, PDBj:5ymx
PDBsum5ymx
PubMed31560685
UniProtQ1DB04|MGLA_MYXXD Mutual gliding-motility protein MglA (Gene Name=mglA)

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