Structure of PDB 5ymv Chain A

Receptor sequence
>5ymvA (length=271) Species: 9031 (Gallus gallus) [Search protein sequence]
MELHTLRYIQTAMTDPGPGQPWFVTVGYVDGELFVHYNSTARRYVPRTEW
IAAKADQQYWDGQTQIGQGNEQIDRENLGILQRRYNQTGGSHTVQWMYGC
DILEGGPIRGYYQMAYDGRDFTAFDKGTMTFTAAVPEAVPTKRKWEEESE
PERWKNYLEETCVEWLRRYVEYGKAELGRRERPEVRVWGKEADGILTLSC
RAHGFYPRPIVVSWLKDGAVRGQDAHSGGIVPNGDGTYHTWVTIDAQPGD
GDKYQCRVEHASLPQPGLYSW
3D structure
PDB5ymv An Invariant Arginine in Common with MHC Class II Allows Extension at the C-Terminal End of Peptides Bound to Chicken MHC Class I.
ChainA
Resolution2.197 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 Y43 Q62 I65 N69 I72 N76 I79 R83 W95 Y97 Y111 M113 T140 W144 R152 Y156 W164 Y168 Y8 Y44 Q63 I66 N70 I73 N77 I80 R84 W96 Y98 Y112 M114 T141 W145 R153 Y157 W165 Y169
External links
PDB RCSB:5ymv, PDBe:5ymv, PDBj:5ymv
PDBsum5ymv
PubMed30341185
UniProtP15979|HA1F_CHICK Class I histocompatibility antigen, F10 alpha chain

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