Structure of PDB 5yln Chain A

Receptor sequence
>5ylnA (length=348) Species: 373153 (Streptococcus pneumoniae D39) [Search protein sequence]
AMGSMKAYTYVKPGLASFVDVDKPVIRKPTAIVRIVKTTICGTDLHIIKG
DVPTCQSGTILGHEGIGIVEEVGEGVSNFKKGDKVLISCVCACGKCYYCK
KGIYAHCEDEGGWIFIDGMQAEYLRVPHADNTLYHTPEDLSDEALVMLLP
TGYEIGVLKGKVEPGCSVAIIGSGPVGLAALLTAQFYSPAKLIMVDLDDN
RLETALSFGATHKVNSSDPEKAIKEIYDLTDGRGVDVAIEAVGIPATFDF
CQKIIGVDGTVANCGVHGKPVEFDLDKLWIRNINVTTGLVSTNTTPQLLK
ALESHKIEPEKLVTHYFKLSEIEKAYEVFSKAADHHAKVIIENDISEA
3D structure
PDB5yln Zinc dependent alcohol dehydrogenase 2 from Streptococcus pneumonia - apo form
ChainA
Resolution2.189 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) C38 T40 H43 H60
Catalytic site (residue number reindexed from 1) C41 T43 H46 H63
Enzyme Commision number 1.1.1.1: alcohol dehydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A C38 H60 C41 H63
BS02 ZN A C90 C93 C96 C104 C93 C96 C99 C107
Gene Ontology
Molecular Function
GO:0004022 alcohol dehydrogenase (NAD+) activity
GO:0008270 zinc ion binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5yln, PDBe:5yln, PDBj:5yln
PDBsum5yln
PubMed
UniProtA0A0H2ZRI0

[Back to BioLiP]