Structure of PDB 5yl7 Chain A

Receptor sequence
>5yl7A (length=339) Species: 394751 (Pseudoalteromonas arctica) [Search protein sequence]
STPNDPRFDDQWHYYEQAGGLNLPTAWDTATGSGVVVAVLDTGYRPHADL
NANILPGYDMISNLSVANDGGGRDSDARDPGDAVAANECGTNGAQNSSWH
GTHVAGTVAAVTNNGEGVAGVAYNAKVVPVRVLGKCGGLTSDIADGIIWA
SGGSVSGIPANSNPADVINMSLGGSGSCSSTTQNAINTARSNGTVVVIAA
GNDNDNSANYNPGNCNGVVNVASVGRNGGRAYYSNYGSNIDVAAPGGAQS
FANDSEGVLSTYNSGSSTPSSDSYGYSQGTSMAAPHVAGVAALIKQAKPD
ATPDEIESILKSTTRSFPATCTSCGTGIVDAAAAVAAAS
3D structure
PDB5yl7 Crystal structure of a cold-active protease (Pro21717) from the psychrophilic bacterium, Pseudoalteromonas arctica PAMC 21717, at 1.4 angstrom resolution: Structural adaptations to cold and functional analysis of a laundry detergent enzyme
ChainA
Resolution1.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A H244 G281 G282 L316 G317 H100 G137 G138 L172 G173
BS02 CA A D149 D193 V255 N258 E260 V262 D5 D49 V111 N114 E116 V118
BS03 CA A D213 G215 G216 D218 D69 G71 G72 D74
BS04 CA A D203 D213 D218 D220 D59 D69 D74 D76
BS05 CA A V362 D385 E451 V218 D241 E307
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:5yl7, PDBe:5yl7, PDBj:5yl7
PDBsum5yl7
PubMed29466378
UniProtA0A290S6P3

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