Structure of PDB 5ykn Chain A

Receptor sequence
>5yknA (length=478) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
RWNPSEACRPLVDDAPIFYPTNEDFDDPLGYIEKLRSKAESYGICRIVPP
VAWRPPCPLKEKKIWENSKFPTRIQFIDLLQNRFGFQTGPDFTLAAFQKY
DEYFKECYFQPKVKDLEGEYWRIVEQATDEVEVYYGADLETKKFGSGFPK
YKPGYPISEADQYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGM
CFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRLPDL
FEEQPDLLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFN
CGFNCAEAVNVAPVDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEAT
YCLWELSLSKKKTPVIARWKRVCSEDGLLTKAVKKRVQMEEERLNHLQDG
FSLRKMRECFLCFYDLHMSASSCKCSPNRFACLIHAKDLCSCESKDRYIL
IRHTLDELWALVRALEGDLDAIDLWASK
3D structure
PDB5ykn Structure of the Arabidopsis JMJ14-H3K4me3 Complex Provides Insight into the Substrate Specificity of KDM5 Subfamily Histone Demethylases.
ChainA
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.14.11.67: [histone H3]-trimethyl-L-lysine(4) demethylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A C519 C522 C542 H545 C409 C412 C432 H435
BS02 ZN A C533 C535 C550 C552 C423 C425 C440 C442
External links
PDB RCSB:5ykn, PDBe:5ykn, PDBj:5ykn
PDBsum5ykn
PubMed29233856
UniProtQ8GUI6|JMJ14_ARATH Lysine-specific demethylase JMJ14 (Gene Name=JMJ14)

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