Structure of PDB 5yh8 Chain A

Receptor sequence
>5yh8A (length=510) Species: 1280 (Staphylococcus aureus) [Search protein sequence]
PHMGLEEKKENKQLTYTTVKDIGDMNPHVYGGSMSAESMIYEPLVRNTKD
GIKPLLAKKWDVSEDGKTYTFHLRDDVKFHDGTPFDADAVKKNIDAVQEN
KKLHSWLKISTLIDNVKVKDKYTVELNLKEAYQPALAELAMPRPYVFVSP
KDFKNGTTKDGVKKFDGTGPFKLGEHKKDESADFNKNDQYWGEKSKLNKV
QAKVMPAGETAFLSMKKGETNFAFTDDRGTDSLDKDSLKQLKDTGDYQVK
RSQPMNTKMLVVNSGKKDNAVSDKTVRQAIGHMVNRDKIAKEILDGQEKP
ATQLFAKNVTDINFDMPTRKYDLKKAESLLDEAGWKKGKDSDVRQKDGKN
LEMAMYYDKGSSSQKEQAEYLQAEFKKMGIKLNINGETSDKIAERRTSGD
YDLMFNQTWGLLYDPQSTIAAFKAKNGYESATSGIENKDKIYNSIDDAFK
IQNGKERSDAYKNILKQIDDEGIFIPISHGSMTVVAPKDLEKVSFTQSQY
ELPFNEMQYK
3D structure
PDB5yh8 Mechanistic insights into staphylopine-mediated metal acquisition
ChainA
Resolution2.12 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 8UX A Y27 W103 R140 D224 R225 R393 W406 Y410 N423 Y497 Y30 W106 R143 D227 R228 R396 W409 Y413 N426 Y500 MOAD: Kd=167.8nM
PDBbind-CN: -logKd/Ki=6.78,Kd=167.8nM
Gene Ontology
Molecular Function
GO:0016151 nickel cation binding
GO:0020037 heme binding
GO:1904680 peptide transmembrane transporter activity
Biological Process
GO:0006824 cobalt ion transport
GO:0006829 zinc ion transport
GO:0015675 nickel cation transport
GO:0015833 peptide transport
GO:0055085 transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space
GO:0043190 ATP-binding cassette (ABC) transporter complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5yh8, PDBe:5yh8, PDBj:5yh8
PDBsum5yh8
PubMed29581261
UniProtQ2FVE7|CNTA_STAA8 Metal-staphylopine-binding protein CntA (Gene Name=cntA)

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