Structure of PDB 5ygm Chain A

Receptor sequence
>5ygmA (length=237) Species: 3823 (Canavalia ensiformis) [Search protein sequence]
ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTA
HIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLY
KETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGT
DGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIK
SPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
3D structure
PDB5ygm Heterometal-Coordinated Monomeric Concanavalin A at pH 7.5 from Canavalia ensiformis
ChainA
Resolution1.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A D10 Y12 N14 D19 D10 Y12 N14 D19
BS02 MN A E8 D10 D19 H24 E8 D10 D19 H24
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
GO:0090729 toxin activity
Biological Process
GO:0035821 modulation of process of another organism

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Molecular Function
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Biological Process
External links
PDB RCSB:5ygm, PDBe:5ygm, PDBj:5ygm
PDBsum5ygm
PubMed29025256
UniProtP55915|CONA_CANBR Concanavalin-Br

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