Structure of PDB 5yc4 Chain A
Receptor sequence
>5yc4A (length=60) Species:
3702
(Arabidopsis thaliana) [
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GPLGSDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHI
KQYKCPSCSN
3D structure
PDB
5yc4
Systematic Profiling of Histone Readers in Arabidopsis thaliana.
Chain
A
Resolution
2.697 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
peptide
A
G15 A16 D17 E18 F19 W20 I21 C22 W29 I45 K46
G20 A21 D22 E23 F24 W25 I26 C27 W34 I50 K51
BS02
ZN
A
C7 C10 H31 C34
C12 C15 H36 C39
BS03
ZN
A
C23 C26 C50 C53
C28 C31 C55 C58
Gene Ontology
Molecular Function
GO:0042393
histone binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5yc4
,
PDBe:5yc4
,
PDBj:5yc4
PDBsum
5yc4
PubMed
29386129
UniProt
Q9M2B4
|ALFL3_ARATH PHD finger protein ALFIN-LIKE 3 (Gene Name=AL3)
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