Structure of PDB 5yb2 Chain A

Receptor sequence
>5yb2A (length=36) Species: 11676 (Human immunodeficiency virus 1) [Search protein sequence]
SGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARIL
3D structure
PDB5yb2 Structural Insights into the Mechanisms of Action of Short-Peptide HIV-1 Fusion Inhibitors Targeting the Gp41 Pocket
ChainA
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Q22 W26 K29 Q22 W26 K29
BS02 peptide A Q18 Q22 I28 K29 Q32 L36 Q18 Q22 I28 K29 Q32 L36
BS03 peptide A N9 H19 L20 L23 W26 N9 H19 L20 L23 W26
External links
PDB RCSB:5yb2, PDBe:5yb2, PDBj:5yb2
PDBsum5yb2
PubMed29535974
UniProtP04578|ENV_HV1H2 Envelope glycoprotein gp160 (Gene Name=env)

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