Structure of PDB 5y20 Chain A
Receptor sequence
>5y20A (length=52) Species:
3702
(Arabidopsis thaliana) [
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DTLCGSCGGNYTNDEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPSC
CT
3D structure
PDB
5y20
Systematic Profiling of Histone Readers in Arabidopsis thaliana.
Chain
A
Resolution
2.409 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
peptide
A
T5 N16 D17 F19 W20 I21 C22 E27 W29 K46
T2 N13 D14 F16 W17 I18 C19 E24 W26 K43
BS02
ZN
A
C7 C10 H31 C34
C4 C7 H28 C31
BS03
ZN
A
C23 C26 C50 C53
C20 C23 C47 C50
Gene Ontology
Molecular Function
GO:0042393
histone binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5y20
,
PDBe:5y20
,
PDBj:5y20
PDBsum
5y20
PubMed
29386129
UniProt
Q9FFF5
|ALFL1_ARATH PHD finger protein ALFIN-LIKE 1 (Gene Name=AL1)
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