Structure of PDB 5y1e Chain A

Receptor sequence
>5y1eA (length=308) Species: 743092 (uncultured archaeon MedDCM-OCT-S05-C57) [Search protein sequence]
MILVTGALGQIGTELVLALQEKYGNDKIIASDLKEPENYHCKFEKCDIRD
IETYERINNENKIEIVYHLAAILSAAGEKNPELCHDVNYNGLENVLKTAK
KYNQKLFCPSSIAVFGPDVPKEMTPQNVELNPKTVYGITKVKGEELCDTY
FKEHGIDVRGIRYPGLISWKHKPSGGTTDYAVEMYFDAVESGKYECFVNR
NTRLPMMFMDDAIRATLELMDAPLDSLNYHSNYNLSSMSFSAEELEKEIS
AHVDFNCLYKPDYRQDIADTWPISINDDDARKDWGWEPKFDISKMTEEMI
TNLRRLNE
3D structure
PDB5y1e Product Release Mechanism Associated with Structural Changes in Monomeric l-Threonine 3-Dehydrogenase.
ChainA
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAD A G6 G9 Q10 I11 D32 L33 D47 I48 L69 A70 A71 L73 P109 Y136 K140 Y163 L166 G6 G9 Q10 I11 D32 L33 D47 I48 L69 A70 A71 L73 P109 Y136 K140 Y163 L166
BS02 SER A S74 S111 Y136 G176 T177 T178 S74 S111 Y136 G176 T177 T178
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0008743 L-threonine 3-dehydrogenase activity
Biological Process
GO:0006567 threonine catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5y1e, PDBe:5y1e, PDBj:5y1e
PDBsum5y1e
PubMed28992410
UniProtD6PBM7

[Back to BioLiP]