Structure of PDB 5xxu Chain A

Receptor sequence
>5xxuA (length=198) Species: 5811 (Toxoplasma gondii) [Search protein sequence]
QEDSIAKMLICKAHIGTKNVEHKMRPYVFKSTSEGIHLINLAKTWEKILM
AARVIVAIENPADVLVISARPYGSRAVLKFSQYVGAQAIAGRWTPGMLTN
QITQKFMEPRLLIVTDPRTDAQAVRESAYANVPVIALCDTDSPLEHVDIC
IPCNNKGKESIALMYWLLAREVLYLRGELPSRSVPWDVMVDMFLWRDP
3D structure
PDB5xxu Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii
ChainA
Resolution3.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A H33 R103 P106 T110 N111 I113 T114 Q133 E137 Y140 H22 R92 P95 T99 N100 I102 T103 Q122 E126 Y129
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:5xxu, PDBe:5xxu, PDBj:5xxu
PDBsum5xxu
PubMed28809395
UniProtQ8MPF7|RSSA_TOXGO Small ribosomal subunit protein uS2

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